当前位置:首页 / 科学研究 / 2014
2014
Original Research Articles
-
Zhu, Xiaoquan#, Wang, Fengchao#, Zhao,
Yanyang, Yang, Peng, Chen, Jun, Sun, Hanzi, Liu, Lei, Li, Wenjun, Pan, Lin,
Guo, Yanru, Kou, Zhaohui, Zhang, Yu, Zhou, Cheng, He, Jiang, Zhang, Xue, Li,
Jianxin, Han, Weitian, Li, Jian, Liu, Guanghui, Gao, Shaorong* & Yang, Ze*.
A gain-of-function mutation in Tnni2 impeded bone development through
increasing Hif3a expression in DA2B mice. PLoS Genet 10, e1004589,
doi:10.1371/journal.pgen.1004589 (2014).
-
Zhou, Yu, Wu, Chao, Zhao, Lifeng &
Huang, Niu*. Exploring the early stages of the pH-induced conformational change
of influenza hemagglutinin. Proteins, 82, 2412-2428,
doi:10.1002/prot.24606 (2014).
-
Zhou, Wei-Zhen, Ye, Adam Yongxin, Sun,
Zhong-Kai, Tian, Hope Huiping, Pu, Tad Zhengzhang, Wu, Yu-Yu, Wang, Dan-Dan,
Zhao, Ming-Zhen, Lu, Shu-Juan, Yang, Chang-Hong & Wei, Liping*. Statistical
analysis of twenty years (1993 to 2012) of data from mainland China's first
intervention center for children with autism spectrum disorder. Mol
Autism 5, 52, doi:10.1186/2040-2392-5-52 (2014).
-
Zheng, Sanduo & Ye, Keqiong*.
Purification, crystallization and preliminary X-ray diffraction analysis of
Imp3 in complex with an Mpp10 peptide involved in yeast ribosome biogenesis. Acta
Crystallogr F Struct Biol Commun 70, 918-921, doi:10.1107/S2053230X14010905
(2014).
-
Zheng, Sanduo, Villa, Raffaella, Wang,
Jia, Feng, Yingang, Wang, Jinfeng, Becker, Peter B & Ye, Keqiong*.
Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during
Drosophila dosage compensation. Genes Dev 28, 2652-2662,
doi:10.1101/gad.250936.114 (2014).
-
Zheng, Sanduo, Lan, Pengfei, Liu,
Ximing & Ye, Keqiong*. Interaction between ribosome assembly factors Krr1
and Faf1 is essential for formation of small ribosomal subunit in yeast. J
Biol Chem 289, 22692-22703, doi:10.1074/jbc.M114.584490 (2014).
-
Zhang, Jia-Min, Liu, Xiao-Man, Ding,
Yue-He, Xiong, Liang-Yao, Ren, Jing-Yi, Zhou, Zhi-Xiong, Wang, Hai-Tao, Zhang,
Mei-Jun, Yu, Yang, Dong, Meng-Qiu & Du, Li-Lin*. Fission yeast Pxd1
promotes proper DNA repair by activating Rad16XPF and inhibiting Dna2. PLoS
Biol 12, e1001946, doi:10.1371/journal.pbio.1001946 (2014).
-
Zhang, Jing, Wu, Jinbao, Hong, Benke,
Ai, Wenying, Wang, Xiaoming, Li, Houhua & Lei, Xiaoguang.
Diversity-oriented synthesis of Lycopodium alkaloids inspired by the hidden
functional group pairing pattern. Nat Commun 5, 4614,
doi:10.1038/ncomms5614 (2014).
-
Zhang, Cheng, Lin, Jinzhong, Liu,
Weixiao, Chen, Xining, Chen, Rongchang & Ye, Keqiong*. Structure of Utp21
tandem WD domain provides insight into the organization of the UTPB complex
involved in ribosome synthesis. PLoS One 9, e86540,
doi:10.1371/journal.pone.0086540 (2014).
-
Yao, Qing#, Zhang, Li#, Wan, Xiaobo,
Chen, Jing, Hu, Liyan, Ding, Xiaojun, Li, Lin, Karar, Jayashree, Peng,
Hongzhuang, Chen, She, Huang, Niu, Rauscher, Frank J 3rd & Shao, Feng*.
Structure and specificity of the bacterial cysteine methyltransferase effector
NleE suggests a novel substrate in human DNA repair pathway. PLoS
Pathog 10, e1004522, doi:10.1371/journal.ppat.1004522 (2014).
-
Yao, Qing, Lu, Qiuhe, Wan, Xiaobo, Song,
Feng, Xu, Yue, Hu, Mo, Zamyatina, Alla, Liu, Xiaoyun, Huang, Niu, Zhu, Ping*
& Shao, Feng*. A structural mechanism for bacterial autotransporter
glycosylation by a dodecameric heptosyltransferase family. Elife 3,
doi:10.7554/eLife.03714 (2014).
-
Yang, Xiaoling#, Gao, Hua#, Zhang, Jie,
Xu, Xiaojing, Liu, Xiaoyan, Wu, Xiru, Wei, Liping* & Zhang, Yuehua*. ATP1A3
mutations and genotype-phenotype correlation of alternating hemiplegia of
childhood in Chinese patients. PLoS One 9, e97274,
doi:10.1371/journal.pone.0097274 (2014).
-
Yang, JieLing, Xu, Hao & Shao, Feng*.
Immunological function of familial Mediterranean fever disease protein Pyrin. Sci
China Life Sci 57, 1156-1161, doi:10.1007/s11427-014-4758-3 (2014).
-
Yan, Huan, Peng, Bo, Liu, Yang, Xu,
Guangwei, He, Wenhui, Ren, Bijie, Jing, Zhiyi, Sui, Jianhua & Li, Wenhui*.
Viral entry of hepatitis B and D viruses and bile salts transportation share
common molecular determinants on sodium taurocholate cotransporting
polypeptide. J Virol 88, 3273-3284, doi:10.1128/JVI.03478-13 (2014).
-
Xu, Hao, Yang, Jieling, Gao, Wenqing,
Li, Lin, Li, Peng, Zhang, Li, Gong, Yi-Nan, Peng, Xiaolan, Xi, Jianzhong Jeff,
Chen, She, Wang, Fengchao & Shao, Feng*. Innate immune sensing of bacterial
modifications of Rho GTPases by the Pyrin inflammasome. Nature 513, 237-241,
doi:10.1038/nature13449 (2014).
-
Wu, Yanwei, Cheng, Shiya, Zhao, Hongyu,
Zou, Wei, Yoshina, Sawako, Mitani, Shohei, Zhang, Hong & Wang, Xiaochen*.
PI3P phosphatase activity is required for autophagosome maturation and
autolysosome formation. EMBO Rep 15, 973-981,
doi:10.15252/embr.201438618 (2014).
-
Wu, Kai, Liu, Jia, Zhuang, Na &
Wang, Tao*. UCP4A protects against mitochondrial dysfunction and degeneration
in pink1/parkin models of Parkinson's disease. FASEB J 28, 5111-5121,
doi:10.1096/fj.14-255802 (2014).
-
Wei, Yi, Wang, Hai-Tao, Zhai, Yonggong,
Russell, Paul* & Du, Li-Lin*. Mdb1, a fission yeast homolog of human MDC1,
modulates DNA damage response and mitotic spindle function. PLoS
One 9, e97028, doi:10.1371/journal.pone.0097028 (2014).
-
Wang, Huayi, Sun, Liming, Su, Lijing,
Rizo, Josep, Liu, Lei, Wang, Li-Feng, Wang, Fu-Sheng & Wang, Xiaodong*.
Mixed lineage kinase domain-like protein MLKL causes necrotic membrane
disruption upon phosphorylation by RIP3. Mol Cell 54, 133-146,
doi:10.1016/j.molcel.2014.03.003 (2014).
-
Wang, Chenhui, Guo, Xingting & Xi,
Rongwen*. EGFR and Notch signaling respectively regulate proliferative activity
and multiple cell lineage differentiation of Drosophila gastric stem cells. Cell
Res 24, 610-627, doi:10.1038/cr.2014.27 (2014).
-
Sun, Yinyan, Qi, Yonghe, Liu, Chenxuan,
Gao, Wenqing, Chen, Pan, Fu, Liran, Peng, Bo, Wang, Haimin, Jing, Zhiyi, Zhong,
Guocai & Li, Wenhui*. Nonmuscle myosin heavy chain IIA is a critical factor
contributing to the efficiency of early infection of severe fever with
thrombocytopenia syndrome virus. J Virol 88, 237-248,
doi:10.1128/JVI.02141-13 (2014).
-
Sun, Hanzi, Zhao, Lifeng, Peng, Shiming &
Huang, Niu*. Incorporating replacement free energy of binding-site waters in
molecular docking. Proteins 82, 1765-1776, doi:10.1002/prot.24530 (2014).
-
Shi, Jianjin, Zhao, Yue, Wang, Yupeng,
Gao, Wenqing, Ding, Jingjin, Li, Peng, Hu, Liyan & Shao, Feng*.
Inflammatory caspases are innate immune receptors for intracellular LPS. Nature 514, 187-192, doi:10.1038/nature13683 (2014).
-
Shen, En-Zhi, Song, Chun-Qing, Lin,
Yuan, Zhang, Wen-Hong, Su, Pei-Fang, Liu, Wen-Yuan, Zhang, Pan, Xu, Jiejia,
Lin, Na, Zhan, Cheng, Wang, Xianhua, Shyr, Yu, Cheng, Heping* & Dong,
Meng-Qiu*. Mitoflash frequency in early adulthood predicts lifespan in
Caenorhabditis elegans. Nature 508, 128-132,
doi:10.1038/nature13012 (2014).
-
Pan, Man, Li, Shan, Li, Xiang, Shao,
Feng*, Liu, Lei* & Hu, Hong-Gang*. Synthesis of and specific antibody
generation for glycopeptides with arginine N-GlcNAcylation. Angew
Chem Int Ed Engl 53, 14517-14521, doi:10.1002/anie.201407824 (2014).
-
Mao, Zhuo, Pan, Lu, Wang, Weixiang, Sun,
Jian, Shan, Shan, Dong, Qiang, Liang, Xiaoping, Dai, Linchang, Ding, Xiaojun,
Chen, She, Zhang, Zhuqiang*, Zhu, Bing* & Zhou, Zheng*. Anp32e, a higher
eukaryotic histone chaperone directs preferential recognition for H2A.Z. Cell
Res 24, 389-399, doi:10.1038/cr.2014.30 (2014).
-
Lu, Qiuhe, Yao, Qing, Xu, Yue, Li, Lin,
Li, Shan, Liu, Yanhua, Gao, Wenqing, Niu, Miao, Sharon, Michal, Ben-Nissan,
Gili, Zamyatina, Alla, Liu, Xiaoyun, Chen, She & Shao, Feng*. An
iron-containing dodecameric heptosyltransferase family modifies bacterial
autotransporters in pathogenesis. Cell Host Microbe 16, 351-363,
doi:10.1016/j.chom.2014.08.008 (2014).
-
Liu, Zhang-Wei, Shao, Chang-Rong, Zhang,
Cui-Jun, Zhou, Jin-Xing, Zhang, Su-Wei, Li, Lin, Chen, She, Huang, Huan-Wei,
Cai, Tao & He, Xin-Jian*. The SET domain proteins SUVH2 and SUVH9 are
required for Pol V occupancy at RNA-directed DNA methylation loci. PLoS
Genet 10, e1003948, doi:10.1371/journal.pgen.1003948 (2014).
-
Liu, Z., Zhou, J., Li, Y., Hu, F., Lu,
Y., Ma, M., Feng, Q., Zhang, J. E., Wang, D., Zeng, J., Bao, J., Kim, J. Y.,
Chen, Z. F., El Mestikawy, S. & Luo, M. Dorsal raphe neurons signal reward
through 5-HT and glutamate. Neuron 81, 1360-1374,
doi:10.1016/j.neuron.2014.02.010 (2014).
-
Liu, Y., Cheng, H., Gao, S., Lu, X., He,
F., Hu, L., Hou, D., Zou, Z., Li, Y., Zhang, H., Xu, J., Kang, L., Wang, Q.,
Yuan, W., Gao, Shaorong* & Cheng, Ting*. Reprogramming of MLL-AF9 leukemia
cells into pluripotent stem cells. Leukemia 28, 1071-1080, doi:10.1038/leu.2013.304
(2014).
-
Liu, Wenqiang, Yin, Jiqing, Kou,
Xiaochen, Jiang, Yonghua, Gao, Haibo, Zhao, Yanhong, Huang, Bo, He, Wenteng,
Wang, Hong, Han, Zhiming & Gao, Shaorong*. Asymmetric reprogramming
capacity of parental pronuclei in mouse zygotes. Cell Rep 6, 1008-1016,
doi:10.1016/j.celrep.2014.02.018 (2014).
-
Liu, Chao, Song, Chun-Qing, Yuan,
Zuo-Fei, Fu, Yan, Chi, Hao, Wang, Le-Heng, Fan, Sheng-Bo, Zhang, Kun, Zeng,
Wen-Feng, He, Si-Min, Dong, Meng-Qiu* & Sun, Rui-Xiang*. pQuant improves quantitation
by keeping out interfering signals and evaluating the accuracy of calculated
ratios. Anal Chem 86, 5286-5294, doi:10.1021/ac404246w (2014).
-
Li, Jun, Yu, Yang, Suo, Fang, Sun,
Ling-Ling, Zhao, Dan & Du, Li-Lin*. Genome-wide screens for sensitivity to
ionizing radiation identify the fission yeast nonhomologous end joining factor
Xrc4. G3 (Bethesda) 4, 1297-1306, doi:10.1534/g3.114.011841 (2014).
-
Li, Jun & Du, Li-Lin*. piggyBac
transposon-based insertional mutagenesis for the fission yeast Schizosaccharomyces
pombe. Methods Mol Biol 1163, 213-222,
doi:10.1007/978-1-4939-0799-1_16 (2014).
-
Li, Chao*, Xu, Jiang, Li, Jian, Li,
Qingyun & Yang, Hongchun. Involvement of Arabidopsis HAC family genes in
pleiotropic developmental processes. Plant Signal Behav 9, e28173,
doi:10.4161/psb.28173 (2014).
-
Li, Chao & Lei, Xiaoguang*.
Strategies toward the biomimetic syntheses of oligomeric sesquiterpenoids. J Org
Chem 79, 3289-3295, doi:10.1021/jo5002092 (2014).
-
Le, Rongrong, Kou, Zhaohui, Jiang,
Yonghua, Li, Ming, Huang, Bo, Liu, Wenqiang, Li, Hui, Kou, Xiaochen, He,
Wanzhong, Rudolph, Karl Lenhard, Ju, Zhenyu* & Gao, Shaorong*. Enhanced
telomere rejuvenation in pluripotent cells reprogrammed via nuclear transfer
relative to induced pluripotent stem cells. Cell Stem Cell 14, 27-39,
doi:10.1016/j.stem.2013.11.005 (2014).
-
Jiang, Xian, Jiang, Hui, Shen, Zhirong
& Wang, Xiaodong*. Activation of mitochondrial protease OMA1 by Bax and Bak
promotes cytochrome c release during apoptosis. Proc Natl Acad Sci U S A 111, 14782-14787, doi:10.1073/pnas.1417253111 (2014).
-
Huang, Chang & Zhu, Bing*. H3.3
turnover: a mechanism to poise chromatin for transcription, or a response to
open chromatin? Bioessays 36, 579-584, doi:10.1002/bies.201400005 (2014).
-
Huang, August Y, Xu, Xiaojing, Ye, Adam
Y, Wu, Qixi, Yan, Linlin, Zhao, Boxun, Yang, Xiaoxu, He, Yao, Wang, Sheng,
Zhang, Zheng, Gu, Bowen, Zhao, Han-Qing, Wang, Meng, Gao, Hua, Gao, Ge, Zhang,
Zhichao, Yang, Xiaoling, Wu, Xiru, Zhang, Yuehua* & Wei, Liping*. Postzygotic
single-nucleotide mosaicisms in whole-genome sequences of clinically
unremarkable individuals. Cell Res 24, 1311-1327,
doi:10.1038/cr.2014.131 (2014).
-
He, Xin-Jian*, Ma, Ze-Yang & Liu,
Zhang-Wei. Non-coding RNA transcription and RNA-directed DNA methylation in
Arabidopsis. Mol Plant 7, 1406-1414, doi:10.1093/mp/ssu075 (2014).
-
Han, Yong-Feng, Dou, Kun, Ma, Ze-Yang,
Zhang, Su-Wei, Huang, Huan-Wei, Li, Lin, Cai, Tao, Chen, She, Zhu, Jian-Kang
& He, Xin-Jian*. SUVR2 is involved in transcriptional gene silencing by
associating with SNF2-related chromatin-remodeling proteins in Arabidopsis. Cell
Res 24, 1445-1465, doi:10.1038/cr.2014.156 (2014).
-
Gao, Shuai, Chang, Gang, Tian, Jianhui,
Gao, Shaorong & Cai, Tao*. Identification of the new gene Zrsr1 to
associate with the pluripotency state in induced pluripotent stem cells (iPSCs)
using high throughput sequencing technology. Genom Data 2, 73-77,
doi:10.1016/j.gdata.2014.04.008 (2014).
-
Duan, Jinzhi, Lu, Guangqing, Xie, Zhan,
Lou, Mingliang, Luo, Jiao, Guo, Lei & Zhang, Yu*. Genome-wide
identification of CRISPR/Cas9 off-targets in human genome. Cell Res 24, 1009-1012,
doi:10.1038/cr.2014.87 (2014).
-
Ding, Yang, Wang, Meng, He, Yao, Ye,
Adam Yongxin, Yang, Xiaoxu, Liu, Fenglin, Meng, Yuqi, Gao, Ge* & Wei,
Liping*. "Bioinformatics: introduction and methods," a bilingual
Massive Open Online Course (MOOC) as a new example for global bioinformatics
education. PLoS Comput Biol 10, e1003955, doi:10.1371/journal.pcbi.1003955
(2014).
-
Ding, Xiao#, Yang, Yuan#, Han, Baoda#,
Du, Chengzhi, Xu, Naiqing, Huang, Huanwei, Cai, Tao, Zhang, Aiqun, Han,
Ze-Guang, Zhou, Weiping* & Chen, Liang*. Transcriptomic characterization of
hepatocellular carcinoma with CTNNB1 mutation. PLoS One 9, e95307,
doi:10.1371/journal.pone.0095307 (2014).
-
Ding, JingJin, Luo, Andrew F, Hu, LiYan,
Wang, DaCheng* & Shao, Feng*. Structural basis of the ultrasensitive
calcium indicator GCaMP6. Sci China Life Sci 57, 269-274, doi:10.1007/s11427-013-4599-5
(2014).
-
Coffman, Kimberly, Yang, Bing, Lu, Jie,
Tetlow, Ashley L, Pelliccio, Emelia, Lu, Shan, Guo, Da-Chuan, Tang, Chun, Dong,
Meng-Qiu* & Tamanoi, Fuyuhiko*. Characterization of the Raptor/4E-BP1
interaction by chemical cross-linking coupled with mass spectrometry analysis. J
Biol Chem 289, 4723-4734, doi:10.1074/jbc.M113.482067 (2014).
-
Cheng, Heping*, Wang, Wang, Wang,
Xianhua, Sheu, Shey-Shing, Dirksen, Robert T & Dong, Meng-Qiu*. Cheng et
al. reply. Nature 514, E14-15, doi:10.1038/nature13859 (2014).
-
Chang, Gang, Gao, Shuai, Hou, Xinfeng,
Xu, Zijian, Liu, Yanfeng, Kang, Lan, Tao, Yu, Liu, Wenqiang, Huang, Bo, Kou,
Xiaochen, Chen, Jiayu, An, Lei, Miao, Kai, Di, Keqian, Wang, Zhilong, Tan, Kun,
Cheng, Tao, Cai, Tao, Gao, Shaorong* & Tian, Jianhui*. High-throughput
sequencing reveals the disruption of methylation of imprinted gene in induced
pluripotent stem cells. Cell Res 24, 293-306,
doi:10.1038/cr.2013.173 (2014).
-
Cao, Ran, Huang, Niu & Wang, Yanli*.
Evaluation and application of MD-PB/SA in structure-based hierarchical virtual
screening. J Chem Inf Model 54, 1987-1996, doi:10.1021/ci5003203 (2014).